BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025C02LP1|AL428345
(874 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1766 1698 0.0
>3x_Contig1766
Length = 23951
Score = 1698 bits (856), Expect = 0.0
Identities = 873/877 (99%), Gaps = 3/877 (0%)
Strand = Plus / Plus
Query: 1 atccaatctcagtcatgaaatctaacgcttcagctgccgctgcagaccaaattaagaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 atccaatctcagtcatgaaatctaacgcttcagctgccgctgcagaccaaattaagaccc 1163
Query: 61 atgaatacgaacatttaacttctgtgcctatagtgcagcctctaccaattactgataggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164 atgaatacgaacatttaacttctgtgcctatagtgcagcctctaccaattactgataggt 1223
Query: 121 tgagcagcga--sagctcaaaaatataaacctaatttgccaggtgggttcgaagagtaca 178
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1224 tgagcagcgaagcagctcaaaaatataaacctaatttgccaggtgggttcgaagagtaca 1283
Query: 179 agtctttgcacaaggaatcacttgaaaatccagccaagttttaccatgaacgtgctcagc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1284 agtctttgcacaaggaatcacttgaaaatccagccaagttttaccatgaacgtgctcagc 1343
Query: 239 tgttgaattggttcaaaccatacgatcaagttttcatcccagataccgaag-taaaccaa 297
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1344 tgttgaattggttcaaaccatacgatcaagttttcatcccagataccgaaggtaaaccaa 1403
Query: 298 cttttgagaacaacgcttggtttaccaacggtcaattgaacgcttgttacaatttggtag 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1404 cttttgagaacaacgcttggtttaccaacggtcaattgaacgcttgttacaatttggtag 1463
Query: 358 acagacatgccttcactcaaccaaacaaggttgccattctttatgaagctgatgaaccag 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1464 acagacatgccttcactcaaccaaacaaggttgccattctttatgaagctgatgaaccag 1523
Query: 418 gtcaaggttatagtctcacttatgcggaattgttagaacaagtctgtaaagttgctcaaa 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1524 gtcaaggttatagtctcacttatgcggaattgttagaacaagtctgtaaagttgctcaaa 1583
Query: 478 tcttgcaatactcgatgaacgtcaagaaaggtgacacggtcgcagtttatatgccaatga 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1584 tcttgcaatactcgatgaacgtcaagaaaggtgacacggtcgcagtttatatgccaatga 1643
Query: 538 tcccacaggctttgattaccttgttggcaattactcgtatcggtgccattcattccgttg 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1644 tcccacaggctttgattaccttgttggcaattactcgtatcggtgccattcattccgttg 1703
Query: 598 tttttgctgggttctcttcgaattcattgcgtgatcgtattaacgatgcttactcaaaga 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1704 tttttgctgggttctcttcgaattcattgcgtgatcgtattaacgatgcttactcaaaga 1763
Query: 658 cagtcatcaccaccgatgaatctaagagaggtggtaagaccatcgaaaccaagcgtatcg 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1764 cagtcatcaccaccgatgaatctaagagaggtggtaagaccatcgaaaccaagcgtatcg 1823
Query: 718 tcgatgaagccttgaaggatacccctcaagtaacaaacgttttggtcttcaaacgtactc 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1824 tcgatgaagccttgaaggatacccctcaagtaacaaacgttttggtcttcaaacgtactc 1883
Query: 778 ataacgaaaatatcaagtacattccaggtagggatttggactgggatgaggaagtcaaga 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1884 ataacgaaaatatcaagtacattccaggtagggatttggactgggatgaggaagtcaaga 1943
Query: 838 agtacaaatcttacaccccatgcgaacctgttgactc 874
|||||||||||||||||||||||||||||||||||||
Sbjct: 1944 agtacaaatcttacaccccatgcgaacctgttgactc 1980
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5615
Number of Sequences: 1807
Number of extensions: 5615
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 874
length of database: 10,358,551
effective HSP length: 16
effective length of query: 858
effective length of database: 10,329,639
effective search space: 8862830262
effective search space used: 8862830262
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)